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Bugfix: calculate FWHM for jitter

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This commit is contained in:
Lukas Klass 2020-05-11 13:51:52 +02:00
parent ce0ae58f29
commit 0d1ac338e4
1 changed files with 17 additions and 12 deletions
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29
esbo_etc/classes/psf/Airy.py
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@ -67,12 +67,11 @@ class Airy(IPSF):
elif contained_energy.lower() == "fwhm":
# Width of the FWHM of the airy disk
reduced_observation_angle = 1.028
contained_energy = 0.4738 * u.dimensionless_unscaled
if not np.isclose(obstruction, 0.0):
# Use obstructed airy disk
reduced_observation_angle = newton(lambda y: self.airy(np.pi * y, np.sqrt(obstruction)) - 0.5,
reduced_observation_angle / 2) * 2
contained_energy = self.airy_int(np.pi * reduced_observation_angle / 2, np.sqrt(obstruction))
contained_energy = "fwhm"
elif contained_energy.lower() == "min":
# Width of the first minimum of the airy disk
reduced_observation_angle = 1.22 * 2
@ -81,20 +80,22 @@ class Airy(IPSF):
# Use obstructed airy disk
reduced_observation_angle = fmin(lambda y: self.airy(np.pi * y, np.sqrt(obstruction)),
reduced_observation_angle / 2, disp=False)[0] * 2
contained_energy = self.airy_int(np.pi * reduced_observation_angle / 2, np.sqrt(obstruction))
contained_energy = self.airy_int(np.pi * reduced_observation_angle / 2,
np.sqrt(obstruction)) * u.dimensionless_unscaled
else:
# Calculate the width numerically from the integral of the airy disk
contained_energy = contained_energy / 100 * u.dimensionless_unscaled
reduced_observation_angle = 2 * bisect(
lambda y: self.airy_int(np.pi * y, np.sqrt(obstruction)) - contained_energy.value, 0, 100)
if jitter_sigma is not None:
if jitter_sigma is not None and (isinstance(contained_energy, u.Quantity) or isinstance(contained_energy, str)
and contained_energy.lower() == "fwhm"):
# Convert jitter to reduced observation angle in lambda / d_ap
jitter_sigma = jitter_sigma.to(u.rad).value * self.__d_aperture / self.__wl.to(u.m)
# Calculate necessary grid length to accommodate the psf and 3-sigma of the gaussian
grid_width = (reduced_observation_angle / 2 + 3 * jitter_sigma)
# Calculate the reduced observation angle of a single detector pixel
reduced_observation_angle_pixel = (self.__pixel_size / (
self.__f_number * self.__d_aperture) * self.__d_aperture / self.__wl)
self.__f_number * self.__d_aperture) * self.__d_aperture / self.__wl).decompose()
# Calculate the width of each grid element
dx = reduced_observation_angle_pixel / self.__osf
# Calculate the necessary number of points on the grid
@ -117,13 +118,17 @@ class Airy(IPSF):
kernel, mode="same")
# Reduce the PSF to the positive x-domain
psf = psf[int((psf.shape[0] - 1) / 2):]
# Calculate the rolling integral of the PSF
psf_int = np.cumsum(psf * np.arange(psf.shape[0])) * reduced_observation_angle_pixel.value / self.__osf
# Scale the integral of the disturbed PSF equal to the undisturbed PSF
psf_int = psf_int / psf_int[-1] * total / (4 / np.pi)
# Calculate the reduced observation angle
reduced_observation_angle = np.argmax(
psf_int > contained_energy) * reduced_observation_angle_pixel.value / self.__osf * 2
if isinstance(contained_energy, str) and contained_energy.lower() == "fwhm":
reduced_observation_angle = np.argmax(psf < psf[0] / 2) * reduced_observation_angle_pixel.value /\
self.__osf * 2
else:
# Calculate the rolling integral of the PSF
psf_int = np.cumsum(psf * np.arange(psf.shape[0])) * reduced_observation_angle_pixel.value / self.__osf
# Scale the integral of the disturbed PSF equal to the undisturbed PSF
psf_int = psf_int / psf_int[-1] * total / (4 / np.pi)
# Calculate the reduced observation angle
reduced_observation_angle = np.argmax(
psf_int > contained_energy) * reduced_observation_angle_pixel.value / self.__osf * 2
return reduced_observation_angle * u.dimensionless_unscaled