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Rotation rate csv file generator initial issue added

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Markus Koller
2023-02-11 21:14:34 +01:00
parent 9eb95b56bd
commit 25513cc7c5
4 changed files with 611 additions and 22 deletions
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Test cases/test_sequence_rotation.csv
+361
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@@ -0,0 +1,361 @@
"t [s]","x [T]","y [T]","z [T]"
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236.0,0.0,8.386705679454121e-05,-5.446390350150456e-05
237.0,0.0,8.480480961564141e-05,-5.299192642332239e-05
238.0,0.0,8.571673007021006e-05,-5.1503807491007346e-05
239.0,0.0,8.660254037844273e-05,-5.000000000000197e-05
240.0,0.0,8.746197071393847e-05,-4.84809620246357e-05
241.0,0.0,8.829475928589161e-05,-4.6947156278591105e-05
242.0,0.0,8.910065241883574e-05,-4.5399049973956746e-05
243.0,0.0,8.987940462991567e-05,-4.383711467890985e-05
244.0,0.0,9.063077870366399e-05,-4.226182617407208e-05
245.0,0.0,9.135454576425911e-05,-4.06736643075822e-05
246.0,0.0,9.205048534524308e-05,-3.9073112848929586e-05
247.0,0.0,9.271838545667784e-05,-3.7460659341593446e-05
248.0,0.0,9.33580426497193e-05,-3.583679495453231e-05
249.0,0.0,9.396926207858998e-05,-3.420201433256919e-05
250.0,0.0,9.455185755993087e-05,-3.2556815445718014e-05
251.0,0.0,9.510565162951458e-05,-3.0901699437497125e-05
252.0,0.0,9.563047559630281e-05,-2.9237170472276088e-05
253.0,0.0,9.612616959383119e-05,-2.7563735581702364e-05
254.0,0.0,9.659258262890617e-05,-2.588190451025455e-05
255.0,0.0,9.702957262759902e-05,-2.419218955996928e-05
256.0,0.0,9.743700647852293e-05,-2.2495105434389034e-05
257.0,0.0,9.781476007338e-05,-2.0791169081778497e-05
258.0,0.0,9.816271834476589e-05,-1.9080899537657073e-05
259.0,0.0,9.848077530122034e-05,-1.7364817766695653e-05
260.0,0.0,9.876883405951335e-05,-1.5643446504025735e-05
261.0,0.0,9.902680687415665e-05,-1.3917310096009218e-05
262.0,0.0,9.925461516413187e-05,-1.218693434051745e-05
263.0,0.0,9.945218953682704e-05,-1.0452846326768074e-05
264.0,0.0,9.96194698091743e-05,-8.715574274768568e-06
265.0,0.0,9.975640502598223e-05,-6.975647374415304e-06
266.0,0.0,9.986295347545723e-05,-5.23359562429718e-06
267.0,0.0,9.993908270190947e-05,-3.4899496702529158e-06
268.0,0.0,9.998476951563907e-05,-1.7452406437311914e-06
269.0,0.0,9.999999999999999e-05,-2.860540645027611e-18
270.0,0.0,9.998476951563917e-05,1.7452406437254714e-06
271.0,0.0,9.993908270190969e-05,3.4899496702471983e-06
272.0,0.0,9.986295347545754e-05,5.233595624291466e-06
273.0,0.0,9.975640502598263e-05,6.975647374409598e-06
274.0,0.0,9.961946980917481e-05,8.715574274762869e-06
275.0,0.0,9.945218953682763e-05,1.0452846326762384e-05
276.0,0.0,9.925461516413256e-05,1.218693434051177e-05
277.0,0.0,9.902680687415744e-05,1.3917310096003553e-05
278.0,0.0,9.876883405951424e-05,1.5643446504020087e-05
279.0,0.0,9.848077530122133e-05,1.736481776669002e-05
280.0,0.0,9.816271834476698e-05,1.9080899537651462e-05
281.0,0.0,9.781476007338121e-05,2.0791169081772903e-05
282.0,0.0,9.743700647852421e-05,2.249510543438346e-05
283.0,0.0,9.70295726276004e-05,2.419218955996373e-05
284.0,0.0,9.659258262890763e-05,2.5881904510249023e-05
285.0,0.0,9.612616959383277e-05,2.7563735581696862e-05
286.0,0.0,9.563047559630449e-05,2.9237170472270612e-05
287.0,0.0,9.510565162951636e-05,3.090169943749168e-05
288.0,0.0,9.455185755993274e-05,3.255681544571261e-05
289.0,0.0,9.396926207859195e-05,3.420201433256381e-05
290.0,0.0,9.335804264972136e-05,3.5836794954526964e-05
291.0,0.0,9.271838545667996e-05,3.746065934158815e-05
292.0,0.0,9.205048534524532e-05,3.907311284892432e-05
293.0,0.0,9.135454576426144e-05,4.067366430757697e-05
294.0,0.0,9.06307787036664e-05,4.2261826174066904e-05
295.0,0.0,8.987940462991818e-05,4.383711467890471e-05
296.0,0.0,8.910065241883834e-05,4.539904997395165e-05
297.0,0.0,8.82947592858943e-05,4.694715627858606e-05
298.0,0.0,8.746197071394126e-05,4.8480962024630696e-05
299.0,0.0,8.66025403784456e-05,4.999999999999701e-05
300.0,0.0,8.571673007021301e-05,5.150380749100244e-05
301.0,0.0,8.480480961564445e-05,5.299192642331754e-05
302.0,0.0,8.38670567945443e-05,5.446390350149976e-05
303.0,0.0,8.290375725550615e-05,5.591929034707175e-05
304.0,0.0,8.19152044289012e-05,5.735764363510169e-05
305.0,0.0,8.090169943749684e-05,5.877852522924443e-05
306.0,0.0,7.986355100473144e-05,6.018150231520196e-05
307.0,0.0,7.880107536067441e-05,6.156614753256298e-05
308.0,0.0,7.771459614569937e-05,6.293203910498092e-05
309.0,0.0,7.660444431190015e-05,6.427876096865114e-05
310.0,0.0,7.54709580222796e-05,6.560590289904795e-05
311.0,0.0,7.43144825477419e-05,6.691306063588308e-05
312.0,0.0,7.313537016191957e-05,6.819983600624714e-05
313.0,0.0,7.19339800338677e-05,6.946583704589703e-05
314.0,0.0,7.07106781186574e-05,7.07106781186521e-05
315.0,0.0,6.946583704590244e-05,7.193398003386248e-05
316.0,0.0,6.819983600625262e-05,7.313537016191446e-05
317.0,0.0,6.691306063588866e-05,7.431448254773687e-05
318.0,0.0,6.560590289905361e-05,7.547095802227468e-05
319.0,0.0,6.427876096865689e-05,7.660444431189531e-05
320.0,0.0,6.293203910498676e-05,7.771459614569464e-05
321.0,0.0,6.156614753256888e-05,7.880107536066979e-05
322.0,0.0,6.018150231520794e-05,7.986355100472693e-05
323.0,0.0,5.8778525229250485e-05,8.090169943749244e-05
324.0,0.0,5.7357643635107844e-05,8.191520442889691e-05
325.0,0.0,5.5919290347077975e-05,8.290375725550196e-05
326.0,0.0,5.446390350150605e-05,8.386705679454022e-05
327.0,0.0,5.299192642332389e-05,8.480480961564048e-05
328.0,0.0,5.150380749100887e-05,8.571673007020915e-05
329.0,0.0,5.0000000000003506e-05,8.660254037844184e-05
330.0,0.0,4.8480962024637256e-05,8.74619707139376e-05
331.0,0.0,4.6947156278592683e-05,8.829475928589077e-05
332.0,0.0,4.539904997395834e-05,8.910065241883492e-05
333.0,0.0,4.3837114678911455e-05,8.987940462991489e-05
334.0,0.0,4.22618261740737e-05,9.063077870366323e-05
335.0,0.0,4.0673664307583824e-05,9.13545457642584e-05
336.0,0.0,3.907311284893123e-05,9.205048534524239e-05
337.0,0.0,3.74606593415951e-05,9.271838545667716e-05
338.0,0.0,3.583679495453397e-05,9.335804264971866e-05
339.0,0.0,3.420201433257086e-05,9.396926207858939e-05
340.0,0.0,3.2556815445719695e-05,9.455185755993029e-05
341.0,0.0,3.090169943749882e-05,9.510565162951402e-05
342.0,0.0,2.923717047227779e-05,9.563047559630228e-05
343.0,0.0,2.756373558170408e-05,9.612616959383069e-05
344.0,0.0,2.5881904510256274e-05,9.659258262890569e-05
345.0,0.0,2.4192189559971007e-05,9.702957262759859e-05
346.0,0.0,2.2495105434390772e-05,9.743700647852253e-05
347.0,0.0,2.0791169081780242e-05,9.781476007337964e-05
348.0,0.0,1.908089953765882e-05,9.816271834476555e-05
349.0,0.0,1.7364817766697412e-05,9.848077530122003e-05
350.0,0.0,1.5643446504027497e-05,9.876883405951308e-05
351.0,0.0,1.3917310096010983e-05,9.902680687415641e-05
352.0,0.0,1.2186934340519218e-05,9.925461516413164e-05
353.0,0.0,1.0452846326769846e-05,9.945218953682686e-05
354.0,0.0,8.715574274770343e-06,9.961946980917414e-05
355.0,0.0,6.975647374417082e-06,9.97564050259821e-05
356.0,0.0,5.23359562429896e-06,9.986295347545714e-05
357.0,0.0,3.489949670254698e-06,9.993908270190941e-05
358.0,0.0,1.7452406437329738e-06,9.998476951563905e-05
359.0,0.0,4.643020718423598e-18,9.999999999999999e-05
1 t [s] x [T] y [T] z [T]
2 0.0 0.0 -1.7452406437283511e-06 9.998476951563913e-05
3 1.0 0.0 -3.489949670250097e-06 9.993908270190956e-05
4 2.0 0.0 -5.233595624294383e-06 9.986295347545739e-05
5 3.0 0.0 -6.9756473744125295e-06 9.975640502598241e-05
6 4.0 0.0 -8.715574274765817e-06 9.961946980917455e-05
7 5.0 0.0 -1.0452846326765347e-05 9.945218953682732e-05
8 6.0 0.0 -1.2186934340514746e-05 9.92546151641322e-05
9 7.0 0.0 -1.3917310096006543e-05 9.902680687415703e-05
10 8.0 0.0 -1.5643446504023085e-05 9.876883405951377e-05
11 9.0 0.0 -1.736481776669303e-05 9.84807753012208e-05
12 10.0 0.0 -1.908089953765448e-05 9.81627183447664e-05
13 11.0 0.0 -2.079116908177593e-05 9.781476007338056e-05
14 12.0 0.0 -2.24951054343865e-05 9.743700647852352e-05
15 13.0 0.0 -2.4192189559966768e-05 9.702957262759964e-05
16 14.0 0.0 -2.5881904510252073e-05 9.659258262890682e-05
17 15.0 0.0 -2.7563735581699915e-05 9.612616959383188e-05
18 16.0 0.0 -2.9237170472273675e-05 9.563047559630354e-05
19 17.0 0.0 -3.0901699437494747e-05 9.510565162951534e-05
20 18.0 0.0 -3.2556815445715677e-05 9.455185755993167e-05
21 19.0 0.0 -3.420201433256688e-05 9.396926207859082e-05
22 20.0 0.0 -3.583679495453003e-05 9.335804264972018e-05
23 21.0 0.0 -3.7460659341591216e-05 9.271838545667873e-05
24 22.0 0.0 -3.9073112848927384e-05 9.205048534524402e-05
25 23.0 0.0 -4.0673664307580036e-05 9.135454576426007e-05
26 24.0 0.0 -4.226182617406996e-05 9.063077870366498e-05
27 25.0 0.0 -4.3837114678907755e-05 8.987940462991669e-05
28 26.0 0.0 -4.53990499739547e-05 8.910065241883677e-05
29 27.0 0.0 -4.6947156278589106e-05 8.829475928589268e-05
30 28.0 0.0 -4.8480962024633725e-05 8.746197071393956e-05
31 29.0 0.0 -5.0000000000000016e-05 8.660254037844385e-05
32 30.0 0.0 -5.150380749100544e-05 8.571673007021121e-05
33 31.0 0.0 -5.299192642332052e-05 8.480480961564258e-05
34 32.0 0.0 -5.4463903501502736e-05 8.386705679454238e-05
35 33.0 0.0 -5.591929034707471e-05 8.290375725550414e-05
36 34.0 0.0 -5.735764363510463e-05 8.191520442889916e-05
37 35.0 0.0 -5.877852522924735e-05 8.090169943749473e-05
38 36.0 0.0 -6.018150231520486e-05 7.986355100472926e-05
39 37.0 0.0 -6.156614753256586e-05 7.880107536067216e-05
40 38.0 0.0 -6.293203910498378e-05 7.771459614569705e-05
41 39.0 0.0 -6.427876096865397e-05 7.660444431189777e-05
42 40.0 0.0 -6.560590289905078e-05 7.547095802227717e-05
43 41.0 0.0 -6.691306063588587e-05 7.431448254773938e-05
44 42.0 0.0 -6.819983600624989e-05 7.313537016191701e-05
45 43.0 0.0 -6.946583704589977e-05 7.193398003386506e-05
46 44.0 0.0 -7.07106781186548e-05 7.071067811865471e-05
47 45.0 0.0 -7.193398003386517e-05 6.946583704589967e-05
48 46.0 0.0 -7.313537016191709e-05 6.81998360062498e-05
49 47.0 0.0 -7.431448254773947e-05 6.691306063588577e-05
50 48.0 0.0 -7.547095802227724e-05 6.560590289905067e-05
51 49.0 0.0 -7.660444431189785e-05 6.427876096865388e-05
52 50.0 0.0 -7.771459614569712e-05 6.293203910498368e-05
53 51.0 0.0 -7.880107536067224e-05 6.156614753256577e-05
54 52.0 0.0 -7.986355100472934e-05 6.0181502315204756e-05
55 53.0 0.0 -8.090169943749478e-05 5.8778525229247246e-05
56 54.0 0.0 -8.191520442889923e-05 5.735764363510454e-05
57 55.0 0.0 -8.290375725550421e-05 5.5919290347074614e-05
58 56.0 0.0 -8.386705679454245e-05 5.446390350150263e-05
59 57.0 0.0 -8.480480961564264e-05 5.299192642332041e-05
60 58.0 0.0 -8.571673007021128e-05 5.150380749100534e-05
61 59.0 0.0 -8.660254037844392e-05 4.9999999999999914e-05
62 60.0 0.0 -8.746197071393963e-05 4.848096202463361e-05
63 61.0 0.0 -8.829475928589274e-05 4.6947156278588984e-05
64 62.0 0.0 -8.910065241883682e-05 4.5399049973954584e-05
65 63.0 0.0 -8.987940462991674e-05 4.383711467890765e-05
66 64.0 0.0 -9.063077870366504e-05 4.2261826174069845e-05
67 65.0 0.0 -9.135454576426014e-05 4.067366430757991e-05
68 66.0 0.0 -9.205048534524408e-05 3.907311284892726e-05
69 67.0 0.0 -9.271838545667878e-05 3.7460659341591094e-05
70 68.0 0.0 -9.335804264972022e-05 3.583679495452991e-05
71 69.0 0.0 -9.396926207859087e-05 3.420201433256675e-05
72 70.0 0.0 -9.455185755993171e-05 3.255681544571555e-05
73 71.0 0.0 -9.51056516295154e-05 3.0901699437494625e-05
74 72.0 0.0 -9.563047559630358e-05 2.923717047227355e-05
75 73.0 0.0 -9.612616959383192e-05 2.7563735581699786e-05
76 74.0 0.0 -9.659258262890686e-05 2.5881904510251944e-05
77 75.0 0.0 -9.702957262759967e-05 2.4192189559966636e-05
78 76.0 0.0 -9.743700647852355e-05 2.2495105434386364e-05
79 77.0 0.0 -9.781476007338059e-05 2.0791169081775793e-05
80 78.0 0.0 -9.816271834476641e-05 1.908089953765434e-05
81 79.0 0.0 -9.848077530122083e-05 1.7364817766692885e-05
82 80.0 0.0 -9.876883405951378e-05 1.564344650402294e-05
83 81.0 0.0 -9.902680687415704e-05 1.3917310096006394e-05
84 82.0 0.0 -9.925461516413221e-05 1.2186934340514595e-05
85 83.0 0.0 -9.945218953682734e-05 1.0452846326765189e-05
86 84.0 0.0 -9.961946980917455e-05 8.715574274765657e-06
87 85.0 0.0 -9.975640502598242e-05 6.975647374412368e-06
88 86.0 0.0 -9.986295347545739e-05 5.233595624294219e-06
89 87.0 0.0 -9.993908270190956e-05 3.4899496702499304e-06
90 88.0 0.0 -9.998476951563913e-05 1.7452406437281821e-06
91 89.0 0.0 -9.999999999999999e-05 -1.7151244994428827e-19
92 90.0 0.0 -9.998476951563911e-05 -1.7452406437285252e-06
93 91.0 0.0 -9.993908270190956e-05 -3.489949670250273e-06
94 92.0 0.0 -9.986295347545739e-05 -5.233595624294562e-06
95 93.0 0.0 -9.97564050259824e-05 -6.975647374412711e-06
96 94.0 0.0 -9.961946980917452e-05 -8.715574274766e-06
97 95.0 0.0 -9.945218953682731e-05 -1.0452846326765531e-05
98 96.0 0.0 -9.925461516413217e-05 -1.2186934340514934e-05
99 97.0 0.0 -9.9026806874157e-05 -1.3917310096006731e-05
100 98.0 0.0 -9.876883405951374e-05 -1.564344650402328e-05
101 99.0 0.0 -9.848077530122077e-05 -1.7364817766693227e-05
102 100.0 0.0 -9.816271834476635e-05 -1.908089953765467e-05
103 101.0 0.0 -9.781476007338052e-05 -2.079116908177613e-05
104 102.0 0.0 -9.743700647852348e-05 -2.2495105434386696e-05
105 103.0 0.0 -9.70295726275996e-05 -2.4192189559966968e-05
106 104.0 0.0 -9.659258262890676e-05 -2.5881904510252273e-05
107 105.0 0.0 -9.612616959383182e-05 -2.756373558170012e-05
108 106.0 0.0 -9.563047559630347e-05 -2.9237170472273875e-05
109 107.0 0.0 -9.510565162951529e-05 -3.090169943749494e-05
110 108.0 0.0 -9.45518575599316e-05 -3.2556815445715866e-05
111 109.0 0.0 -9.396926207859076e-05 -3.420201433256708e-05
112 110.0 0.0 -9.335804264972008e-05 -3.583679495453023e-05
113 111.0 0.0 -9.271838545667864e-05 -3.7460659341591406e-05
114 112.0 0.0 -9.205048534524394e-05 -3.907311284892758e-05
115 113.0 0.0 -9.135454576425999e-05 -4.067366430758023e-05
116 114.0 0.0 -9.06307787036649e-05 -4.226182617407013e-05
117 115.0 0.0 -8.987940462991662e-05 -4.3837114678907904e-05
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src/rotating_field.py
+3 -3
View File
@@ -3,18 +3,18 @@ import matplotlib.pyplot as plt
plot_fontsize = 12
in_rotvector = [0, 0, 1] # [-]
in_rot_vector = [0, 0, 1] # [-]
in_rotcenter = [0, 0, 0] # [uT]
in_rotmag = 10 # [uT]
in_rotrate = 1 # [deg/s]
in_timestep = 1 # [s]
# Normalize rotation vector
if np.linalg.norm(in_rotvector)==0:
if np.linalg.norm(in_rot_vector)==0:
# ui_print("Error: Rotation axis cannot be singular.")
raise ValueError('Zero vector for rotation axis given!')
else:
v = in_rotvector / np.linalg.norm(in_rotvector)
v = in_rot_vector / np.linalg.norm(in_rot_vector)
# Find perpendiculat vectors
if v[1] == 0 and v[2] == 0:
a = np.cross(v, [0, 1, 0])
src/user_interface.py
+230 -19
View File
@@ -27,7 +27,7 @@ import src.csv_logging as log
from src.calibration import AmbientFieldCalibration, CoilConstantCalibration, MagnetometerCalibrationSimple, \
MagnetometerCalibrationComplete
from src.exceptions import DeviceAccessError, MagFieldOutOfBounds
from src.utility import ui_print, save_dict_list_to_csv, load_dict_list_from_csv
from src.utility import ui_print, save_dict_list_to_csv, save_dict_list_to_csv2, load_dict_list_from_csv
import src.helmholtz_cage_device as helmholtz_cage_device
# Define global font styles:
@@ -43,6 +43,7 @@ DEFAULT_FONT = (font, points[2])
target_values = [np.nan, np.nan, np.nan, np.nan]
class HelmholtzGUI(Tk):
# main application window, almost everything else here is called from this class
# Inherited base class: Tk(), main application window class
@@ -407,6 +408,13 @@ class ExecuteCSVMode(Frame):
self.z_override = BooleanVar(value=False) # True to disable connection check for Z PSU
self.arduino_override = BooleanVar(value=False) # True to disable connection check for arduino
# Generate CSV sequence variables
self.rot_vector_vars = [DoubleVar(value=1), DoubleVar(value=0), DoubleVar(value=0)]
self.rot_center_vars = [DoubleVar(value=0), DoubleVar(value=0), DoubleVar(value=0)]
self.rot_mag_vars = StringVar(value=100)
self.rot_rate_vars = StringVar(value=1)
self.time_step_vars = StringVar(value=1)
# --- UI ELEMENTS ---
row_counter = 0 # keep track of which grid row we are in
@@ -480,6 +488,81 @@ class ExecuteCSVMode(Frame):
self.plot_canvas = None # Is generated upon plotting
# Second panel with CSV generator
# setup header
col_counter = 1
row_counter = 0 # reset row counter
header = Label(self, text="Generate CSV File", font=HEADER_FONT, padx=100, pady=3)
header.grid(row=row_counter, column=col_counter, padx=100, sticky=W)
row_counter += 1
generate_csv_button_frame = Frame(self)
generate_csv_button_frame.grid(row=row_counter, column=col_counter, padx=100, sticky=W)
# Generate and export csv sequence
self.generate_export_csv_button = Button(generate_csv_button_frame, text=" Generate and Export to CSV",
command=self.export_csv_sequence,
state="normal",
pady=5, padx=5)
self.generate_export_csv_button.grid(row=0, column=0, padx=5, pady=5)
# Generate and export csv sequence
self.generate_load_csv_button = Button(generate_csv_button_frame, text=" Generate and Load Sequence",
command=self.generate_load_csv_sequence,
state="normal",
pady=5, padx=5)
self.generate_load_csv_button.grid(row=0, column=1, padx=5, pady=5)
row_counter += 1
info_text = Label(self, text="Generate data of a circular, counter clockwise motion around an arbitrary axis and strength.",
padx=100, pady=3)
info_text.grid(row=row_counter, column=col_counter, padx=0, sticky=W)
row_counter += 1
# Inputs and generation button
input_csv_gen_frame = LabelFrame(self, text="Input Parameters for Rotating Magnetic Field")
input_csv_gen_frame.grid(row=row_counter, column=col_counter, padx=(100, 0), pady=20, sticky="nw")
for i, label in enumerate(['X', 'Y', 'Z']):
axis_label = Label(input_csv_gen_frame, text=label)
axis_label.grid(row=row_counter, column=i + 1, padx=5, pady=5, sticky="nw")
row_counter += 1
rot_vector_label = Label(input_csv_gen_frame, text="Axis of rotation: ")
rot_vector_label.grid(row=row_counter, column=0, padx=5, pady=5, sticky="nw")
for i in range(3):
rot_vector_data = Entry(input_csv_gen_frame,
textvariable=self.rot_vector_vars[i],
width=15)
rot_vector_data.grid(row=row_counter, column=i + 1, padx=5, pady=5, sticky="nw")
rot_vector_unit = Label(input_csv_gen_frame, text="-")
rot_vector_unit.grid(row=row_counter, column=4, padx=5, pady=5, sticky="nw")
row_counter += 1
rot_center_label = Label(input_csv_gen_frame, text="Center of rotation: ")
rot_center_label.grid(row=row_counter, column=0, padx=5, pady=5, sticky="nw")
for i in range(3):
rot_center_data = Entry(input_csv_gen_frame,
textvariable=self.rot_center_vars[i],
width=15)
rot_center_data.grid(row=row_counter, column=i + 1, padx=5, pady=5, sticky="nw")
rot_center_unit = Label(input_csv_gen_frame, text="\u03BCT")
rot_center_unit.grid(row=row_counter, column=4, padx=5, pady=5, sticky="nw")
row_counter += 1
rot_mag_label = Label(input_csv_gen_frame, text="Field magnitude: ")
rot_mag_label.grid(row=row_counter, column=0, padx=5, pady=5, sticky="nw")
rot_mag_data = Entry(input_csv_gen_frame, textvariable=self.rot_mag_vars, width=15)
rot_mag_data.grid(row=row_counter, column=1, padx=5, pady=5, sticky="nw")
rot_mag_unit = Label(input_csv_gen_frame, text="\u03BCT")
rot_mag_unit.grid(row=row_counter, column=4, padx=5, pady=5, sticky="nw")
row_counter += 1
rot_rate_label = Label(input_csv_gen_frame, text="Rotation rate: ")
rot_rate_label.grid(row=row_counter, column=0, padx=5, pady=5, sticky="nw")
rot_rate_data = Entry(input_csv_gen_frame, textvariable=self.rot_rate_vars, width=15)
rot_rate_data.grid(row=row_counter, column=1, padx=5, pady=5, sticky="nw")
rot_rate_unit = Label(input_csv_gen_frame, text="\u00b0/s")
rot_rate_unit.grid(row=row_counter, column=4, padx=5, pady=5, sticky="s")
row_counter += 1
time_step_label = Label(input_csv_gen_frame, text="Time step: ")
time_step_label.grid(row=row_counter, column=0, padx=5, pady=5, sticky="nw")
time_step_data = Entry(input_csv_gen_frame, textvariable=self.time_step_vars, width=15)
time_step_data.grid(row=row_counter, column=1, padx=5, pady=5, sticky="nw")
time_step_unit = Label(input_csv_gen_frame, text="s")
time_step_unit.grid(row=row_counter, column=4, padx=5, pady=5, sticky="s")
def page_switch(self): # function that is called when switching to this window
# every class in the UI needs this, even if it doesn't do anything
pass
@@ -570,7 +653,8 @@ class ExecuteCSVMode(Frame):
figure = csv_threading.plot_field_sequence(self.sequence_array, width, height) # create figure to be displayed
# Clear previous plots first
try:
self.plot_canvas.get_tk_widget().destroy()
if self.plot_canvas != None:
self.plot_canvas.get_tk_widget().destroy()
except Exception as e:
ui_print("Something went wrong while plotting csv data!", e)
messagebox.showerror("Error!", "Something went wrong while plotting csv data: \n%s" % e)
@@ -581,6 +665,132 @@ class ExecuteCSVMode(Frame):
self.plot_canvas.draw() # equivalent to matplotlib.show()
self.plot_canvas.get_tk_widget().grid(row=0, column=0, sticky="nesw") # place canvas in the UI
def export_csv_sequence(self): # Generate and export csv sequence
# Generate rotation data
t, x, y, z = self.generate_csv_sequence()
# Assemble data to export
rot_sequence = dict(enumerate(t))
for i in range(len(t)):
rot_sequence[i] = {'Time (s)': t[i], 'xField (T)': x[i], 'yField (T)': y[i], 'zField (T)': z[i]}
# Save dictionary to disk
save_dict_list_to_csv2('test_sequence_rotation.csv', rot_sequence, query_path=True)
ui_print("Saved test sequence to disc.")
print("Flag1")
def generate_load_csv_sequence(self): # Generate and load csv sequence
# Generate rotation data
t, x, y, z = self.generate_csv_sequence()
# Write data into array
temp_array = np.ndarray((len(t),4))
for i in range(len(t)):
temp_array[i] = [t[i], x[i], y[i], z[i]]
self.sequence_array = temp_array
try: # try to check the values and display the plot
csv_threading.check_array_ok(self.sequence_array) # check for values exceeding limits
self.sequence_array_ok = True # Has nothing to do with limits. Just means the data was parsed
self.display_plot() # plot data and display
except Exception as e: # something went wrong
self.sequence_array_ok = False
# display error messages:
ui_print("Error while plotting rotation sequence:", e)
messagebox.showerror("Error!", "Error while plotting rotation sequence: \n%s" % e)
else: # nothing went wrong
self.execute_button["state"] = "normal" # activate run button --> enable execution
def generate_csv_sequence(self):
# Some fixed values
rot_center_gmean_max = 100 # [µT] Maximum geometric mean
rot_center_default = [0, 0, 0] # [µT]
rot_mag_default = 100 # [µT]
rot_mag_max = 180 # [µT]
rot_rate_default = 1 # [deg/s]
rot_rate_max = 360 # [deg/s]
rot_timestep_default = 1 # [s]
rot_timestep_min = 0.2 # [s]
# Initialize and get vectors
rot_vector = [0, 0, 0]
rot_center = [0, 0, 0]
for i in range(len(rot_vector)):
rot_vector[i] = float(self.rot_vector_vars[i].get()) # [-]
rot_center[i] = float(self.rot_center_vars[i].get()) # [uT]
rot_mag = float(self.rot_mag_vars.get()) # [uT]
rot_rate = float(self.rot_rate_vars.get()) # [deg/s]
rot_time_step = float(self.time_step_vars.get()) # [s]
# Normalize rotation vector
if np.linalg.norm(rot_vector) == 0:
ui_print("Error: Rotation axis cannot be singular.")
raise ValueError('Zero vector for rotation axis given!')
else:
v = rot_vector / np.linalg.norm(rot_vector)
if np.linalg.norm(rot_vector) != 1:
ui_print("Warning: Rotation axis not normalised. Normalising automatically.")
for i in range(len(rot_vector)):
self.rot_vector_vars[i].set("{:.3f}".format(v[i]))
# Checking magnitude
if rot_mag < 0:
ui_print("Warning: Magnetic field magnitude cannot be negative. Changing sign automatically.")
rot_mag = -rot_mag
elif rot_mag ==0:
ui_print("Warning: Magnetic field magnitude cannot be zero. Setting default automatically.")
rot_mag = rot_mag_default
elif rot_mag > rot_mag_max:
ui_print("Warning: Magnetic field magnitude too large. Setting default automatically.")
rot_mag = rot_mag_default
self.rot_mag_vars.set("{:.3f}".format(rot_mag))
# Checking center point
if np.sqrt(rot_center[0]**2+rot_center[1]**2+rot_center[2]**2) > rot_center_gmean_max:
ui_print("Warning: Rotation center excessive. Setting to zero automatically.")
rot_center = rot_center_default
for i in range(len(rot_center)):
self.rot_center_vars[i].set("{:.3f}".format(rot_center[i]))
# Checking rotation rate
if rot_rate < 0:
ui_print("Warning: Rotation rate cannot be negative. Changing sign automatically.")
rot_rate = -rot_rate
elif rot_mag ==0:
ui_print("Warning: Rotation rate cannot be zero. Setting default automatically.")
rot_rate = rot_rate_default
elif rot_rate > rot_rate_max:
ui_print("Warning: Rotation rate too large. Setting default automatically.")
rot_rate = rot_rate_default
self.rot_rate_vars.set("{:.3f}".format(rot_rate))
# Check time step
if rot_time_step < 0:
ui_print("Warning: Time step cannot be negative. Changing sign automatically.")
rot_time_step = -rot_time_step
elif rot_time_step ==0:
ui_print("Warning: Time step cannot be zero. Setting default automatically.")
rot_time_step = rot_timestep_default
elif rot_time_step < rot_timestep_min:
ui_print("Warning: Time step too small. Setting default automatically.")
rot_time_step = rot_timestep_default
self.time_step_vars.set("{:.3f}".format(rot_time_step))
# Find perpendicular vectors
if v[1] == 0 and v[2] == 0:
a = np.cross(v, [0, 1, 0])
else:
a = np.cross(v, [1, 0, 0])
b = np.cross(v, a)
# Calculate timing
cycle_time = (360 / rot_rate) / rot_time_step
arr_len = int(np.floor(cycle_time / rot_time_step))
# Initialize vectors
th = 0 # [rad]
t = np.zeros(arr_len) # [s]
x = np.zeros(arr_len) # [T]
y = np.zeros(arr_len) # [T]
z = np.zeros(arr_len) # [T]
# Calculate vectors
for i in range(arr_len):
th = th + rot_rate * np.pi / 180
t[i] = i * rot_time_step
x[i] = (rot_center[0] + rot_mag * np.cos(th) * a[0] + rot_mag * np.sin(th) * b[0])*1e-6
y[i] = (rot_center[1] + rot_mag * np.cos(th) * a[1] + rot_mag * np.sin(th) * b[1])*1e-6
z[i] = (rot_center[2] + rot_mag * np.cos(th) * a[2] + rot_mag * np.sin(th) * b[2])*1e-6
# Return vectors
return t, x, y, z
class CalibrateAmbientField(Frame):
def __init__(self, parent, controller):
@@ -651,22 +861,22 @@ class CalibrateAmbientField(Frame):
axis_labels_hh = ['X_hh:', 'Y_hh:', 'Z_hh:', 'T_hh:']
for i in range(4):
field_data_axis_label = Label(field_data_frame, text=axis_labels_mgm[i])
field_data_axis_label.grid(row=i+1, column=0, padx=10, pady=3)
field_data_axis_label.grid(row=i + 1, column=0, padx=10, pady=3)
field_data_axis_data = Label(field_data_frame, textvariable=self.field_value_vars[i])
field_data_axis_data.grid(row=i+1, column=1, padx=(20, 0), pady=3)
field_data_axis_data.grid(row=i + 1, column=1, padx=(20, 0), pady=3)
field_data_axis_units = Label(field_data_frame, text="\u03BCT")
field_data_axis_units.grid(row=i+1, column=2, padx=5, pady=3)
field_data_axis_units.grid(row=i + 1, column=2, padx=5, pady=3)
field_data_axis_label = Label(field_data_frame, text=axis_labels_hh[i])
field_data_axis_label.grid(row=i+1, column=3, padx=10, pady=3)
field_data_axis_label.grid(row=i + 1, column=3, padx=10, pady=3)
field_data_axis_data = Label(field_data_frame, textvariable=self.target_value_vars[i])
field_data_axis_data.grid(row=i+1, column=4, padx=(20, 0), pady=3)
field_data_axis_data.grid(row=i + 1, column=4, padx=(20, 0), pady=3)
field_data_axis_units = Label(field_data_frame, text="\u03BCT")
field_data_axis_units.grid(row=i+1, column=5, padx=5, pady=3)
field_data_axis_units.grid(row=i + 1, column=5, padx=5, pady=3)
row_counter += 1
# Calibration start and reinitialize buttons
@@ -840,7 +1050,8 @@ class CalibrateAmbientField(Frame):
# Display in uT
self.field_value_vars[i].set("{:.3f}".format(new_field[i] * 1e6))
self.target_value_vars[i].set("{:.3f}".format(target_values[i] * 1e6))
self.field_value_vars[3].set("{:.3f}".format(np.sqrt(new_field[0]**2+new_field[1]**2+new_field[2]**2) * 1e6))
self.field_value_vars[3].set(
"{:.3f}".format(np.sqrt(new_field[0] ** 2 + new_field[1] ** 2 + new_field[2] ** 2) * 1e6))
self.target_value_vars[3].set("{:.3f}".format(target_values[3] * 1e6))
# Get mpi messages from calibration procedures
@@ -1330,7 +1541,8 @@ class CalibrateMagnetometerSimple(Frame):
# Display in uT
self.field_value_vars[i].set("{:.3f}".format(new_field[i] * 1e6))
self.target_value_vars[i].set("{:.3f}".format(target_values[i] * 1e6))
self.field_value_vars[3].set("{:.3f}".format(np.sqrt(new_field[0]**2+new_field[1]**2+new_field[2]**2)* 1e6))
self.field_value_vars[3].set(
"{:.3f}".format(np.sqrt(new_field[0] ** 2 + new_field[1] ** 2 + new_field[2] ** 2) * 1e6))
self.target_value_vars[3].set("{:.3f}".format(target_values[3] * 1e6))
# Get mpi messages from calibration procedures
@@ -1749,7 +1961,7 @@ class CalibrateMagnetometerComplete(Frame):
state='readonly')
axis_data.grid(row=row_counter + row, column=1 + column, padx=5, pady=5, sticky="nw")
results_label_unit = Label(calibration_results_frame, text="-")
results_label_unit.grid(row=row_counter + row, column=1 + column+1, padx=5, pady=5, sticky="nw")
results_label_unit.grid(row=row_counter + row, column=1 + column + 1, padx=5, pady=5, sticky="nw")
row_counter += 3
"""
# A_mat
@@ -1774,7 +1986,7 @@ class CalibrateMagnetometerComplete(Frame):
state='readonly')
axis_data.grid(row=row_counter, column=1 + row, padx=5, pady=5, sticky="nw")
results_label_unit = Label(calibration_results_frame, text="T")
results_label_unit.grid(row=row_counter, column=1 + row+1, padx=5, pady=5, sticky="nw")
results_label_unit.grid(row=row_counter, column=1 + row + 1, padx=5, pady=5, sticky="nw")
row_counter += 1
# Save calibration buttons
@@ -1828,8 +2040,6 @@ class CalibrateMagnetometerComplete(Frame):
pady=5, padx=5)
self.export_figure_right_button.grid(row=1, column=2, padx=5, pady=5)
# FLAG Buttons
# This starts an endless polling loop
self.update_view()
@@ -1852,7 +2062,8 @@ class CalibrateMagnetometerComplete(Frame):
# Display in uT
self.field_value_vars[i].set("{:.3f}".format(new_field[i] * 1e6))
self.target_value_vars[i].set("{:.3f}".format(target_values[i] * 1e6))
self.field_value_vars[3].set("{:.3f}".format(np.sqrt(new_field[0]**2+new_field[1]**2+new_field[2]**2)* 1e6))
self.field_value_vars[3].set(
"{:.3f}".format(np.sqrt(new_field[0] ** 2 + new_field[1] ** 2 + new_field[2] ** 2) * 1e6))
self.target_value_vars[3].set("{:.3f}".format(target_values[3] * 1e6))
# Get mpi messages from calibration procedures
@@ -2730,10 +2941,10 @@ class StatusDisplay(Frame):
self.update_labels(new_status)
target_values = [new_status['axes'][0]['target_field'],
new_status['axes'][1]['target_field'],
new_status['axes'][2]['target_field'],
np.sqrt(new_status['axes'][0]['target_field']**2 +
new_status['axes'][1]['target_field']**2 +
new_status['axes'][2]['target_field']**2)]
new_status['axes'][2]['target_field'],
np.sqrt(new_status['axes'][0]['target_field'] ** 2 +
new_status['axes'][1]['target_field'] ** 2 +
new_status['axes'][2]['target_field'] ** 2)]
except Empty:
pass
self.controller.after(200, self.update_label_poll_method)
src/utility.py
+17
View File
@@ -31,8 +31,25 @@ def save_dict_list_to_csv(filename, data, query_path=False):
csv_writer.writeheader()
for row in data:
print(row)
csv_writer.writerow(row)
def save_dict_list_to_csv2(filename, data, query_path=False):
"""Creates a csv file under the specified path containing one row for each dict in the list 'data'.
The file receives a header containing the keys of the first dict entry.
Each dict should use the same keys."""
if query_path:
filename = filedialog.asksaveasfilename(initialfile=filename, title="Select csv save location...",
filetypes=(("CSV", "*.csv"),))
with open(filename, mode='w', newline='') as csv_file:
fieldnames = data[0].keys()
csv_writer = csv.DictWriter(csv_file, fieldnames=fieldnames, delimiter=',', quotechar='"',
quoting=csv.QUOTE_NONNUMERIC)
csv_writer.writeheader()
for row in data:
csv_writer.writerow(data[row]) # this line makes issues in original file
def load_dict_list_from_csv(filename, query_path=False):
""" Reads a csv file under the specified path containing one row for each dict in the list 'data'.